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/home/cluster1/data/bu01/1121861/jlex/rdloci/alignments/all_red_alleles.dnd
( ( ( ( ( ( ( ( ( ( ( ( ( ( ( ( ( 26695_Red_locus1_SN:0.00661, 26695_Red_locus2_SN:0.00372) :0.02358, 26695_Red_locus1_NK:0.01001) :0.01625, J99_Red_locus1_NK:0.04189) :0.00290, J254_Red_locus1_NK:0.01712) :0.00360, ( M-00-12_Red_Locus_1_NK:-0.01293, ( ( M-00-12_Red_Locus_2_NK:0.06769, ( M-00-14_Red_Locus_1_NK:0.02693, M-HP1_Red_Locus_1_NK:-0.00161) :0.01273) :0.00448, M-00-14_Red_Locus_2_NK:-0.00602) :0.01269) :0.01674) :0.00362, ( ( J170_Red_locus1_NK:0.01427, ( J178_Red_locus1_NK:0.01419, J282_Red_locus1_NK:0.01940) :0.00124) :0.00598, ( ( J178_Red_locus2_EQ:0.01719, J230_Red_locus1_NK:0.01899) :0.00291, ( J258_Red_locus1_SN:0.01064, J282_Red_locus2_EQ:0.00745) :0.02163) :0.00371) :0.00148) :0.00990, ( 26695_Red_locus2_NK:0.02714, ( ( ( ( ( ( ( ( ( ( 98-147_Red_locus2_KD:0.01581, 98-182_Red_locus2_KD:-0.01581) :0.01850, 98-171_Red_locus2_KD:0.00023) :0.00440, M-00-14_Red_Locus_2_KD:0.00027) :0.00177, ( ( ( 98-150_Red_locus2_EQ:-0.02808, J254_Red_locus2_EQ:0.09515) :0.04784, 98-180_Red_locus2_KD:0.00381) :0.00832, 98-212_Red_locus2_KD:-0.00490) :0.00887) :0.01036, 98-151_Red_locus2_KD:-0.01405) :0.00885, 98-208_Red_locus2_KD:0.00474) :0.00206, ( 98-169_Red_locus2_KD:0.00077, ( 98-210_Red_locus2_KD:0.00315, J166_Red_locus2_KD:0.00318) :0.00533) :0.00122) :0.00657, 98-170_Red_locus2_KD:0.00209) :0.00363, 98-152_Red_locus2_KD:0.00851) :0.00709, 98-149_Red_locus2_KD:-0.00090) :0.00440) :0.00347) :0.01563, J166_Red_locus1_KD:0.00341) :0.00619, 98-180_Red_locus1_NK:0.01400) :0.00095, ( ( ( 98-149_Red_locus1_NK:-0.00027, 98-152_Red_locus1_NK:0.00027) :0.00015, 98-150_red_locus1_NK:-0.00015) :0.00000, 98-151_Red_locus1_NK:0.00000) :0.00463) :0.00064, 98-182_Red_locus1_NK:0.00000) :0.00000, 98-208_Red_locus1_NK:0.00000) :0.00000, 98-210_Red_locus1_NK:0.00000) :0.00000, 98-169_Red_locus1_NK:0.00000) :0.00000, 98-171_Red_locus1_NK:0.00000) :0.00000, 98-212_Red_locus1_NK:0.00000) :0.00000, 98-147_Red_locus1_NK:0.00000, 98-170_Red_locus1_NK:0.00000);